Olier, Ivan; Orhobor, Oghenejokpeme I.; Dash, Tirtharaj; Davis, Andy M.; Soldatova, Larisa N; Vanschoren, Joaquin and King, Ross D.. 2021. Transformational machine learning: Learning how to learn from many related scientific problems. Proceedings of the National Academy of Sciences, 118(49), e2108013118. ISSN 0027-8424 [Article]

Wang, Kanix; Stevens, Robert; Alachram, Halima; Li, Yu; Soldatova, Larisa N; King, Ross; Ananiadou, Sophia; Schoene, Annika M.; Li, Maolin; Christopoulou, Fenia; Ambite, José Luis; Matthew, Joel; Garg, Sahil; Hermjakob, Ulf; Marcu, Daniel; Sheng, Emily; Beißbarth, Tim; Wingender, Edgar; Galstyan, Aram; Gao, Xin; Chambers, Brendan; Pan, Weidi; Khomtchouk, Bohdan B.; Evans, James A. and Rzhetsky, Andrey. 2021. NERO: a biomedical named-entity (recognition) ontology with a large, annotated corpus reveals meaningful associations through text embedding. npj Systems Biology and Applications, 7(1), 38. ISSN 2056-7189 [Article]

Coutant, Anthony; Roper, Katherine; Trejo-Banos, Daniel; Bouthinon, Dominique; Carpenter, Martin; Grzebyta, Jacek; Santini, Guillaume; Soldano, Henry; Elati, Mohamed; Ramon, Jan; Rouveirol, Celine; Soldatova, Larisa N and King, Ross D.. 2019. Closed-loop cycles of experiment design, execution, and learning accelerate systems biology model development in yeast. Proceedings of the National Academy of Sciences, 116(36), pp. 18142-18147. ISSN 0027-8424 [Article]

Olier, Ivan; Sadawi, Noureddin; Bickerton, G. Richard; Vanschoren, Joaquin; Grosan, Crina; Soldatova, Larisa N and King, Ross D.. 2018. Meta-QSAR: a large-scale application of meta-learning to drug design and discovery. Machine Learning, 107(1), pp. 285-311. ISSN 0885-6125 [Article]

Bandrowski, Anita; Brinkman, Ryan; Brochhausen, Mathias; Brush, Matthew H; Bug, Bill; Chibucos, Marcus C; Clancy, Kevin; Courtot, Mélanie; Derom, Dirk; Dumontier, Michel; Fan, Liju; Fostel, Jennifer; Fragoso, Gilberto; Gibson, Frank; Gonzalez-Beltran, Alejandra; Haendel, Melissa A; He, Yongqun; Heiskanen, Mervi; Hernandez-Boussard, Tina; Jensen, Mark; Lin, Yu; Lister, Allyson L; Lord, Phillip; Malone, James; Manduchi, Elisabetta; McGee, Monnie; Morrison, Norman; Overton, James A; Parkinson, Helen; Peters, Bjoern; Rocca-Serra, Philippe; Ruttenberg, Alan; Sansone, Susanna-Assunta; Scheuermann, Richard H; Schober, Daniel; Smith, Barry; Soldatova, Larisa N; Stoeckert, Christian J; Taylor, Chris F; Torniai, Carlo; Turner, Jessica A; Vita, Randi; Whetzel, Patricia L and Zheng, Jie. 2016. The Ontology for Biomedical Investigations. PLoS ONE, 11(4), e0154556. ISSN 1932-6203 [Article]

Panov, Panče; Soldatova, Larisa N and Džeroski, Sašo. 2016. Generic ontology of datatypes. Information Sciences, 329, pp. 900-920. ISSN 0020-0255 [Article]

Quinn, Jacqueline Y; Cox, Robert Sidney; Adler, Aaron; Beal, Jacob; Bhatia, Swapnil; Cai, Yizhi; Chen, Joanna; Clancy, Kevin; Galdzicki, Michal; Hillson, Nathan J; Le Novère, Nicolas; Maheshwari, Akshay J; McLaughlin, James Alastair; Myers, Chris J; P, Umesh; Pocock, Matthew; Rodriguez, Cesar; Soldatova, Larisa N; Stan, Guy-Bart V; Swainston, Neil; Wipat, Anil and Sauro, Herbert M. 2015. SBOL Visual: A Graphical Language for Genetic Designs. PLoS Biology, 13(12), e1002310. ISSN 1544-9173 [Article]

Williams, Kevin; Bilsland, Elizabeth; Sparkes, Andrew; Aubrey, Wayne; Young, Michael; Soldatova, Larisa N; De Grave, Kurt; Ramon, Jan; de Clare, Michaela; Sirawaraporn, Worachart; Oliver, Stephen G and King, Ross D. 2015. Cheaper faster drug development validated by the repositioning of drugs against neglected tropical diseases. Journal of the Royal Society, Interface, 12(104), 20141289. ISSN 1742-5662 [Article]

Soldatova, Larisa N; Nadis, Daniel; King, Ross D; Basu, Piyali S; Haddi, Emma; Baumlé, Véronique; Saunders, Nigel J; Marwan, Wolfgang and Rudkin, Brian B. 2014. EXACT2: the semantics of biomedical protocols. BMC bioinformatics, 15 Sup, S5. ISSN 1471-2105 [Article]

Sami, Ishrat; Russell-Rose, Tony and Soldatova, Larisa N. 2023. 'A Cognitive Theoretical Approach of Rhetorical News Analysis'. In: Text2Story - Sixth Workshop on Narrative Extraction from Texts held in conjunction with the 45th European Conference on Information Retrieval (ECIR 2023). Dublin, Ireland 2 April 2023. [Conference or Workshop Item]

Sami, Ishrat; Russell-Rose, Tony and Soldatova, Larisa N. 2022. 'Comprehensive contextual visualization of a news archive for aiding story planning'. In: Text2Story 2022. Stavanger, Norway 10 April 2022. [Conference or Workshop Item]

Sami, Ishrat; Russell-Rose, Tony and Soldatova, Larisa N. 2022. 'Comprehensive Terms Board Visualization for News Analysis and Editorial Story Planning'. In: Text2Story - Sixth Workshop on Narrative Extraction from Texts held in conjunction with the 45th European Conference on Information Retrieval (ECIR 2023). Dublin, Ireland 2 April 2023. [Conference or Workshop Item]